KripoDB
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  • Data update
  • DiVe visualization
  • API
  • CLI
KripoDB
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  • Welcome to KripoDB’s documentation!
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Welcome to KripoDB’s documentation!¶

For installation and usage see https://github.com/3D-e-Chem/kripodb/blob/master/README.md

  • Data update
    • Baseline update
    • Incremental update
    • Steps
    • Disk layout
    • Requirements
  • DiVe visualization
    • 1. LargeVis input file from Kripo similarity matrix
    • 2. Perform embedding using LargeVis
    • 3. Generate DiVE metadata datafiles
    • 4. Create DiVE input file
  • API
    • kripodb.canned
    • kripodb.db
    • kripodb.dive
    • kripodb.frozen
    • kripodb.hdf5
    • kripodb.makebits
    • kripodb.modifiedtanimoto
    • kripodb.pairs
    • kripodb.pharmacophores
    • kripodb.pdb
    • kripodb.script
    • kripodb.webservice
  • CLI
    • Positional Arguments
    • Named Arguments
    • Sub-commands:

Indices and tables¶

  • Index
  • Module Index
  • Search Page
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© Copyright 2016, Nederlands eScience Center. Revision 23369214.

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